Before you go cutting any wires you need to plug them into the transformer to 1. check they're working and 2. check with a meter and mark which are the +ve and -ve wires. Being diodes they are polarity sensitive. Best not do a 'trial and error' style test, if you connect them up the wrong way you will burn them out, don't ask how I know that I:
Once you've got the polarities sorted, just connect them up in parallel to your switched 12v supply as reqd. Probably best to keep the wire lengths roughly equal. Jay has mentioned above fitting a 12v regulated supply for LEDs but mine have been fine on the leisure battery which goes up to about 13.7v with the charger on.
I found the recent batch of Dioders to be a warm white ( the originals were daylight ), if anyone's looking for something whiter then the Saxby 13843 Zest daylight white are the ones to go for.